Law separated the teams into different Tiers, and then numbered them 1-30. The Blue Jays ranked in Tier 6, the second lowest, and 25th overall. The other teams in Tier 6 were Miami Marlins (No. 22) followed by Colorado Rockies, West Sacramento Athletics, Toronto and Texas Rangers. Law wrote, "In fairness, they nearly won the World Series, and traded a lot of prospects to get there, sending nearly all of their top pitching prospects after Trey Yesavage to other clubs to bolster their roster for the stretch run."
The Red Sox currently have five players ranked among Baseball America's Top 100 prospects, retaining a highly regarded farm system despite recent changes.